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Choose refgenome by ST


The SNP data must be generated using the specified reference genome if they are going to be deposited in this database. This tool tells users which reference genome they should use based on the input ST number.

 

Note that no MLST scheme is available for Bacillus anthracis, Mycobacterium tuberculosis and Yersinia pestis since the three species have single-clone population structure. Accordingly, they each have one reference genome only in this database, i.e. str. Ames (accession no. NC_003997) for B. anthracis, str. H37Rv (accession no. NC_000962) for M. tuberculosis, and str. CO92 (accession no. NC_003143) for Y. pestis.


 

help

 

Please enter a sequence type (ST):