Isolate

Accession Number

ST

Host

Disease

Isolation Source

Country State

Collection Year

Serovar

Antimicrobial resistance gene

Virulence gene

01_18QAVK011Homo sapienstyphoid feverbloodBrazil:Sao Paulo2018Typhiaac(6')-IaaECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaC,ssaJ,ssaK,ssaL,ssaO,ssaQ,ssaR,ssaT,ssaV,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-000073CGQB011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-000934CJLS011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-001056CGUT011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-002043CHGH011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-004103CJVK011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ABZJ_00085,ABZJ_00086,ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilN,pilO,pilP,pilQ,pilS,pilU,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaC,ssaJ,ssaK,ssaL,ssaO,ssaQ,ssaR,ssaT,ssaV,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-005164CJNN011Homo sapiens--Cambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2EC958_1421,ECP_0108,ECS88_3547,STM0570,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,iacP,iagB,ibeC,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,misL,motB,ompA,orgB,orgC,pagN,phoP,phoQ,pilK,pilN,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,prgH,prgI,prgK,ratB,rpoS,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciV,sciW,sefA,shdA,sicA,sicP,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopE,spaP,spaQ,spaS,sptP,ssaC,ssaI,ssaL,ssaM,ssaN,ssaO,ssaQ,ssaR,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,sspH2,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stdA,stdB,stdC,steA,steB,steC,steD,steE,stgA,stgB,stgC,stgD,sthA,sthB,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviE,vexA,vexD,vexE,vgrS
01-2010-005183CHMT011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilU,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
01-2010-005821CJNB011Homo sapiens-bloodCambodia2010Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilN,pilO,pilP,pilQ,pilS,pilU,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-000112CJVC011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaC,ssaJ,ssaK,ssaL,ssaO,ssaQ,ssaR,ssaT,ssaV,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-000113CEZN011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilU,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-000309CFAR011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaC,ssaJ,ssaK,ssaL,ssaO,ssaQ,ssaR,ssaT,ssaV,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-000483CHMW011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-000664CGQT011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,siiE,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaC,ssaJ,ssaK,ssaL,ssaO,ssaQ,ssaR,ssaT,ssaV,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-001522CEXX011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,siiE,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-002432CINF011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,flhE,fliA,fliB,fliD,fliE,fliG,fliJ,fliL,fliM,fliO,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilN,pilO,pilP,pilQ,pilS,pilU,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-004759CGVF011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilM,pilO,pilP,pilQ,pilS,pilT,pilV,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaS,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-005568CGUR011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,siiE,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2011-005712CGPD011Homo sapiens-bloodCambodia2011Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,phoQ,pilK,pilN,pilO,pilP,pilQ,pilS,pilT,pilV,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,siiE,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaD,ssaJ,ssaL,ssaN,ssaQ,ssaR,ssaU,sscA,sscB,sseC,sseD,sseE,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staD,staF,staG,stbA,stbB,stbD,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviE,vexA,vexB,vexC,vexD,vexE,vgrS
01-2012-001846CJWA011Homo sapiens-bloodCambodia2012Typhiaac(6')-Iaa,aph(6)-Id,blaTEM-1B,catA1,dfrA7,sul1,sul2,tet(B)ECP_0108,ECS88_3547,STM0570,STY1498,bcfA,bcfB,bcfC,bcfD,bcfE,bcfF,bcfG,bcfH,cdtB,cheA,cheR,cheW,cheY,cheZ,clpV,csgA,csgB,csgC,csgD,csgE,csgF,csgG,fepG,fimA,fimC,fimD,fimF,fimH,fimI,fimW,fimY,fimZ,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgL,flgM,flgN,flhB,flhC,flhD,fliA,fliB,fliD,fliE,fliG,fliI,fliJ,fliL,fliM,fliO,fliP,fliQ,fliR,fliS,fliY,fliZ,flk,fur,hilA,hilC,hilD,ibeC,inv,invA,invC,invE,invF,invJ,iroB,iroC,iroD,iroE,iroN,mgtB,mgtC,mig-14,misL,motB,ompA,pagN,phoP,pilK,pilN,pilO,pilP,pilQ,pilS,pilU,pilV2,pipB,pipB2,pltA,pltB,prgH,prgK,ratB,rpoS,safA,safB,safC,safD,sciA,sciC,sciD,sciF,sciH,sciI,sciK,sciN,sciO,sciQ,sciT,sciU,sciV,sciW,sefA,sefB,sefD,sefR,shdA,sifA,sifB,siiE,sinH,sipA,sipB,sipC,sipD,slrP,sopA,sopB/sigD,sopD,sopD2,sopE,sopE2,spaO,spaR,spiC/ssaB,sprB,sptP,ssaC,ssaJ,ssaK,ssaL,ssaO,ssaQ,ssaR,ssaT,ssaV,sscA,sscB,sseB,sseC,sseD,sseE,sseF,sseG,sseJ,sseL,sspH2,ssrA,ssrB,staA,staB,staC,staD,staE,staG,stbA,stbB,stbE,stcA,stcB,stcC,stcD,stdA,stdB,stdC,steA,steB,steC,stgA,stgB,stgC,stgD,sthA,sthB,sthC,sthD,sthE,tar/cheM,tcfA,tcfB,tcfC,tcfD,tviA,tviB,tviC,tviD,vexA,vexB,vexC,vexD,vexE,vgrS
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