Isolate

Accession Number

ST

Host

Disease

Isolation Source

Country State

Collection Year

Antimicrobial resistance gene

Virulence gene

00-0949CP0103018Homo sapiensCampylobacter gastroenteritis-Canada: Quebec2000-03-10blaOXA-61Cj0596,Cj1135,Cj1137c,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuA,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliF,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldD,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf3,maf6,maf7,neuB2,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseI,rpoN,waaC,waaF,waaV,wlaN
00-1597CP0103062132Homo sapiensCampylobacter gastroenteritis-Canada: Alberta2000-04-05-CJJ81176_1153,CJJ81176_1158,CJJ81176_1160,Cj0596,JJD26997_1747,cadF,cdtA,cheA,cheV,chuB,chuD,ciaB,ctuA,eptC,flaA,flaB,flaD,flgD,flgE,flgF,flgG,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliY,flpA,jlpA,kpsD,kpsE,kpsS,maf3,maf4,maf6,maf7,neuB2,neuC2,pebA,pglA,pglB,pglE,pglF,pglI,plfA,porA,pseA,pseB,pseC,pseE/maf5,pseG,pseI,rpoN,waaC,waaD,waaF
00-2425CP00672921Homo sapiens-stool sampleCanada2000blaOXA-61Cj1135,Cj1136,Cj1138,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1434c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuB,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldE,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf3,maf7,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseG,pseI,rpoN,waaC,waaF,waaV
00-2426CP00670821Homo sapiens-stool sampleCanada2000blaOXA-61Cj1135,Cj1136,Cj1138,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1434c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuB,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldE,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf3,maf7,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseG,pseI,rpoN,waaC,waaF,waaV
00-2538CP00670721Homo sapiens-stool sampleCanada2000blaOXA-61Cj1135,Cj1136,Cj1138,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1434c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuB,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldE,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf3,maf7,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseG,pseI,rpoN,waaC,waaF,waaV
00-2544CP00670921Homo sapiens-stool sampleCanada2000blaOXA-61Cj1135,Cj1136,Cj1138,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1434c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuB,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldE,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf3,maf7,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseG,pseI,rpoN,waaC,waaF,waaV
00-6200CP010307806Homo sapiensCampylobacter gastroenteritis-Canada: Ontario2000-07-18blaOXA-61CJJ81176_1153,CJJ81176_1157,CJJ81176_1158,CJJ81176_1425,Cj1418c,JJD26997_1747,cadF,cdtB,cheA,cheV,chuB,ciaB,ctuA,eptC,flaA,flaB,flaD,flgD,flgE,flgF,flgG,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliY,flpA,hddA,hldD,jlpA,kpsD,kpsE,kpsF,kpsS,maf3,maf6,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE,pseG,pseI,rpoN,waaC
01-1512CP0100728Homo sapiensCampylobacter gastroenteritis-Canada: New Brunswick2001-03-15blaOXA-61Cj0596,Cj1135,Cj1137c,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuA,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliF,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldD,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf3,maf7,neuB2,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseI,rpoN,waaC,waaF,waaV,wlaN
04197CAFU0121-----blaOXA-61C8J_0044,CJJ81176_1428,Cj0371,Cj0596,Cj0883c,Cj1135,Cj1136,Cj1417c,Cj1419c,Cj1420c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1435c,Cj1437c,Cj1440c,cadF,cdtB,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,ctuA,cysC,eptC,fcl,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgJ,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhF,flhG,fliA,fliD,fliE,fliF,fliH,fliI,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,glf,gmhB,hddA,hddC,hldE,jlpA,kfiD,kpsD,kpsE,kpsF,kpsM,kpsS,motA,motB,neuC1,neuC2,pebA,pflA,pglA,pglB,pglD,pglE,pglF,pglG,pglH,pglJ,porA,pseA,pseB,pseC,pseE/maf5,pseF,pseH,pseI,ptmA,rfbC,rpoN,waaC,waaF,waaV,wlaN
04199CAFV0121-----blaOXA-61,tet(O)CJJ81176_1428,Cj0371,Cj0596,Cj1135,Cj1136,Cj1138,Cj1416c,Cj1417c,Cj1419c,Cj1420c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1435c,Cj1436c,Cj1437c,Cj1440c,cadF,cdtA,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,cstIII,ctuA,eptC,fcl,flaA,flaB,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgJ,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhF,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,glf,gmhA,gmhB,hddA,hddC,hldD,jlpA,kfiD,kpsD,kpsE,kpsF,kpsM,kpsS,maf3,motA,motB,neuC1,neuC2,pebA,pflA,pglA,pglB,pglD,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseD/maf2,pseE/maf5,pseF,pseH,pseI,ptmB,rfbC,rpoN,waaC,waaF
100CP023446NAchicken--Brazil:Pelotas2016aph(3')-III,blaOXA-61,tet(O)C8J_1343,C8J_1345,C8J_1346,CJJ81176_1419,Cj0596,Cj1135,Cj1137c,Cj1138,Cj1416c,Cj1418c,Cj1419c,Cj1427c,Cj1442c,JJD26997_1759,cadF,cheA,cheV,chuB,chuD,ciaB,cstIII,ctuA,eptC,fcl,flaC,flaD,flgE,flgF,flgG,flgI,flgK,flgR,flgS,flhA,flhB,fliD,fliG,fliH,fliI,fliR,flpA,hldE,jlpA,kpsC,kpsD,kpsE,kpsF,motA,neuC1,pebA,pglA,pglB,pglE,pglF,pglI,plfA,porA,pseA,pseB,pseC,pseG,pseI,rpoN,waaC,waaF,waaV
10186AUUG011919Homo sapiens-stoolViet Nam-blaOXA-61C8J_1075,C8J_1076,C8J_1078,C8J_1080,C8J_1083,C8J_1085,C8J_1087,C8J_1089,CJE1288,CJJ81176_1415,CJJ81176_1416,CJJ81176_1418,CJJ81176_1422,CJJ81176_1424,CJJ81176_1425,CJJ81176_1428,CJJ81176_1431,CJJ81176_1433,CJJ81176_1434,CJJ81176_1436,Cj0371,Cj0596,Cj0883c,Cj1420c,cadF,cdtB,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,ctuA,eptC,fcl,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgG,flgG2,flgH,flgJ,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhG,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,jlpA,kpsD,kpsE,kpsF,kpsM,kpsS,motA,motB,neuC2,pebA,pglA,pglB,pglD,pglE,pglF,pglH,pglJ,plfA,porA,pseA,pseB,pseC,pseH,pseI,ptmB,rpoN,waaC,waaD,waaF,waaV,wcbK
10227AUUI01460Homo sapiens-stoolViet Nam-tet(O)CJE1288,CJJ81176_1153,CJJ81176_1155,CJJ81176_1156,CJJ81176_1157,CJJ81176_1158,CJJ81176_1160,CJJ81176_1162,CJJ81176_1414,CJJ81176_1418,CJJ81176_1422,CJJ81176_1425,CJJ81176_1430,Cj0371,Cj0596,Cj0883c,Cj1417c,Cj1420c,Cj1442c,JJD26997_1759,cadF,cdtA,cdtC,cheA,cheV,cheW,cheY,chuB,chuZ,ciaB,ciaC,eptC,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgG,flgG2,flgH,flgI,flgJ,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhF,flhG,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,gmhA-1,jlpA,kpsD,kpsE,kpsF,kpsM,kpsS,motA,motB,neuC2,pebA,pglB,pglD,pglE,pglG,pglI,plfA,porA,pseA,pseB,pseC,pseG,pseI,ptmA,rpoN,waaD,waaF,waaM,waaV,wcbK
104CP023343607--chickenBrazil:Pelotas2017-CJJ81176_1153,CJJ81176_1154,CJJ81176_1157,CJJ81176_1158,CJJ81176_1160,Cj0596,Cj1442c,cadF,cdtA,cheA,cheV,chuB,chuD,ciaB,ctuA,eptC,flaC,flaD,flgD,flgE,flgG,flgG2,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliG,fliH,fliI,fliK,fliM,fliR,fliY,flpA,jlpA,kpsD,kpsE,kpsF,motA,pebA,pglA,pglB,pglE,pglF,pglG,pglH,pglJ,plfA,porA,pseA,pseB,pseC,pseG,pseI,rpoN,waaC,waaD,waaF
110-21AIPC01982bovine--USA-blaOXA-61,tet(O)CJJ81176_1422,CJJ81176_1428,Cj0371,Cj0596,Cj0883c,Cj1135,Cj1137c,Cj1416c,Cj1417c,Cj1419c,Cj1427c,Cj1432c,Cj1435c,Cj1436c,Cj1437c,JJD26997_1767*,cadF,cdtA,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,cstIII,ctuA,eptC,fcl,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgJ,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhF,flhG,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,glf,gmhA,gmhB,hddA,hddC,hldD,jlpA,kfiD,kpsD,kpsE,kpsF,kpsM,kpsS,motA,motB,neuC1,neuC2,pebA,pflA,pglA,pglB,pglD,pglE,pglF,pglH,pglJ,porA,pseA,pseB,pseC,pseF,pseH,pseI,ptmA,rpoN,waaC,waaF,waaV,wlaN
11168H_araECP02255943Homo sapiens----blaOXA-61,cat,tet(O)Cj1135,Cj1136,Cj1138,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1434c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuA,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliF,fliH,fliI,fliK,fliM,flpA,glf,hddA,hddC,hldD,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf4,maf6,maf7,neuB2,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglG,pglH,pglJ,porA,pseA,pseB,pseC,pseD/maf2,pseE/maf5,pseI,rpoN,waaC,waaF
11168H_lacYCP02243943Homo sapiens----blaOXA-61,catCj1135,Cj1136,Cj1138,Cj1418c,Cj1421c,Cj1422c,Cj1426c,Cj1427c,Cj1432c,Cj1433c,Cj1434c,Cj1436c,Cj1437c,Cj1440c,JJD26997_1747,cadF,cheA,cheV,chuA,ciaB,cstIII,ctuA,eptC,fcl,flaA,flaB,flaD,flgD,flgE,flgI,flgK,flgR,flgS,flhA,flhB,flhF,flhG,fliD,fliF,fliH,fliI,fliK,fliY,flpA,glf,hddA,hddC,hldE,jlpA,kfiD,kpsD,kpsE,kpsF,kpsS,maf4,maf6,maf7,neuB2,neuC1,neuC2,pflA,pglA,pglB,pglE,pglF,pglG,pglH,pglJ,porA,pseA,pseB,pseC,pseD/maf2,pseI,rpoN,waaC,waaF
11601MDLKCR01NA--Turkey Merckel's DiverticulumUSA: Eastern North CarolinaSep-2006aph(3')-III,blaOXA-184,tet(O)CJE1278,CJE1280,CJE1288,CJE1602,CJE1604,CJE1606,CJE1608,CJE1610,CJE1614,CJE1615,Cj0371,Cj0596,Cj0883c,cadF,cdtB,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,eptC,fcl,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgG,flgG2,flgH,flgI,flgJ,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhG,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,gmhA-1,jlpA,kpsD,kpsE,kpsF,kpsM,kpsS,maf3,maf6,maf7,motA,motB,neuC2,pebA,pflA,pglB,pglC,pglE,pglF,pglG,pglH,pglJ,porA,pseA,pseB,pseC,pseE,pseH,pseI,ptmB,rpoN,waaC,waaD,waaF,waaV
1213AIPG01132bovine-dairy cow, adultUSA: Grandview WA, Yakima county, farm#8Jul-02-CJE1277,CJJ81176_1158,CJJ81176_1161,CJJ81176_1162,CJJ81176_1169,CJJ81176_1414,CJJ81176_1424,CJJ81176_1425,CJJ81176_1430,Cj0371,Cj0596,Cj0883c,Cj1416c,Cj1417c,Cj1419c,Cj1442c,JJD26997_1753,JJD26997_1763,cadF,cdtB,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,eptC,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgF,flgG,flgH,flgI,flgK,flgM,flgP,flgR,flgS,flhA,flhB,flhF,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,hddC,jlpA,kpsD,kpsE,kpsF,kpsS,kpsT,motA,neuB2,pebA,pglB,pglC,pglE,pglF,pglH,plfA,porA,pseA,pseB,pseC,pseF,pseH,pseI,ptmB,rpoN,waaC,waaD,waaF,waaV
12502CYRV015Chicken-SupermarketUnited Kingdom2011-01-01-C8J_1075,C8J_1076,C8J_1078,C8J_1080,C8J_1082,C8J_1084,C8J_1085,C8J_1087,C8J_1089,CJE1288,CJJ81176_1415,CJJ81176_1416,CJJ81176_1419,CJJ81176_1421,CJJ81176_1424,CJJ81176_1425,CJJ81176_1430,Cj0371,Cj0596,Cj1419c,Cj1442c,cadF,cdtA,cdtC,cheA,cheV,cheW,cheY,chuB,chuD,chuZ,ciaB,ciaC,ctuA,eptC,flaC,flaD,flaG,flgA,flgB,flgC,flgD,flgE,flgE2,flgG,flgG2,flgH,flgI,flgK,flgM,flgQ,flgR,flgS,flhA,flhB,flhG,fliA,fliD,fliE,fliG,fliH,fliI,fliK,fliL,fliN,fliP,fliQ,fliR,fliS,fliW,fliY,flpA,gmhA2,jlpA,kpsD,kpsE,kpsF,kpsM,kpsS,maf3,motA,motB,neuB2,neuC2,pebA,pglB,pglC,pglE,pglF,pglI,plfA,porA,pseA,pseB,pseC,pseF,pseH,pseI,ptmB,rpoN,waaC,waaD,waaF,waaV,wcbK
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